Index

A

AreaPerLipid (class in lipyphilic.analysis.area_per_lipid) AssignCurvedLeaflets (class in lipyphilic.leaflets.assign_leaflets)

AssignLeaflets (class in lipyphilic.leaflets.assign_leaflets) average() (lipyphilic.analysis.z_thickness.ZThickness static method)

C

calc_density_2D() (lipyphilic.plotting.plotting.JointDensity method)

count_neighbours() (lipyphilic.analysis.neighbours.Neighbours method)

D

diffusion_coefficient() (lipyphilic.analysis.lateral_diffusion.MSD method)

F

filter_leaflets() (lipyphilic.leaflets.assign_leaflets.AssignCurvedLeaflets method)

FlipFlop (class in lipyphilic.analysis.flip_flop)

I

interpolate() (lipyphilic.plotting.plotting.JointDensity method) (lipyphilic.plotting.plotting.ProjectionPlot method)

J

JointDensity (class in lipyphilic.plotting.plotting)

L

largest_cluster() (lipyphilic.analysis.neighbours.Neighbours method) lipyphilic.analysis.area_per_lipid module lipyphilic.analysis.flip_flop module lipyphilic.analysis.lateral_diffusion module lipyphilic.analysis.memb_thickness module lipyphilic.analysis.neighbours module lipyphilic.analysis.order_parameter module

lipyphilic.analysis.registration module lipyphilic.analysis.z_angles module lipyphilic.analysis.z_positions module lipyphilic.analysis.z_thickness module lipyphilic.leaflets.assign_leaflets module lipyphilic.plotting.plotting module lipyphilic.transformations.transformations module

M

MembThickness (class in lipyphilic.analysis.memb_thickness) module lipyphilic.analysis.area_per_lipid lipyphilic.analysis.flip_flop lipyphilic.analysis.lateral_diffusion lipyphilic.analysis.memb_thickness lipyphilic.analysis.neighbours lipyphilic.analysis.order_parameter lipyphilic.analysis.registration lipyphilic.analysis.z_angles lipyphilic.analysis.z_positions lipyphilic.analysis.z_thickness lipyphilic.leaflets.assign_leaflets lipyphilic.plotting.plotting lipyphilic.transformations.transformations

MSD (class in lipyphilic.analysis.lateral_diffusion)

N

Neighbours (class in lipyphilic.analysis.neighbours)

nojump (class in lipyphilic.transformations.transformations)

P

plot_density() (lipyphilic.plotting.plotting.JointDensity method) plot_projection() (lipyphilic.plotting.plotting.ProjectionPlot method) project_area() (lipyphilic.analysis.area_per_lipid.AreaPerLipid method)

project_SCC() (lipyphilic.analysis.order_parameter.SCC method) project_values() (lipyphilic.plotting.plotting.ProjectionPlot method) ProjectionPlot (class in lipyphilic.plotting.plotting)

R

Registration (class in lipyphilic.analysis.registration)

S

SCC (class in lipyphilic.analysis.order_parameter)

W

weighted_average() (lipyphilic.analysis.order_parameter.SCC static method)

Z

ZAngles (class in lipyphilic.analysis.z_angles)

ZPositions (class in lipyphilic.analysis.z_positions) ZThickness (class in lipyphilic.analysis.z_thickness)